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ABOUT THIS RECORD
ID:
MNEST007319
species:
Aplysia californica
miRNA family:
miR-2479
source:
miRNEST
Taxonomy by NCBI:
Aplysia californica
Aplysia
Aplysiidae
Aplysioidea
Aplysiomorpha
Opisthobranchia
Euthyneura
Heterobranchia
Apogastropoda
Orthogastropoda
Gastropoda
Mollusca
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGTTTGTATTGTTTTTGTTGT
miRNA*
GACAGTCTTTGCAAGCTTG
mismatches:
4
bulges:
2
View larger
pre-miRNA
AATGTCTCACAT
GACAGTCTTTGCAAGCTTG
TCTTTGTGGATTAGTCTACTAGAGGATTTAGTCGGTTGGAGTGTGGATATACTATTATCATGTTTGCCA
TCAGTTGTGTCCGTTTGTTTGTCTTGATTTGAACTTTCCATTTATC
AGTTTGTATTGTTTTTGTTGT
TTGTTGTTT
dot-bracket secondary structure
((((...((.((
(((((....((((((((.(
(....(((((..(((.((....(((((.(((.(((...((..((((((((.........))))))))..
))........))).)))...)))))....)).))).)))))..)).
))))))))......)))))))
.)).)))).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record