miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST007391
species: Solanum tuberosum
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTACTCCCTCCGTCCCATTTT

miRNA*
 AATGGGACGGAGGGAGTACTT

mismatches: 1
bulges: 0
View larger
pre-miRNA
 TTATGTATATTCTACTCCCTCCGTCCCATTTTATGTGGCACCATTTCCTTTTTGGTCAGTCCCAAAAAGAATGTCACATTTTCTTATATGGTAAGTATTT
AAAGGTACAATTCCTCTTTTACCCTTGTTGGTTCCACTTAATCTTAAAGAAAGTATTCCAATACATTTATGAGGAGAGAGAAAAATGAGTCTACTTTTTA
ATATGACTATTTTTTGAAGGGACAATTTGGTAAACATTTCAAAGTCTTCATTTATTTCTTAAACTCCGTGCCCGGTCAAATGTTGCCACATAAAATGGGA
CGGAGGGAGTACTTAATTTGTT

dot-bracket secondary structure
............((((((((((((((((((((((((((((.(((((.((((((((......))))))))..((((....((((....(((((..(((((.
(((((((..((((.((((((.((..((((((....((((..(((...)))))))...))))))((....)).)).)))))).....)))).))))))).)
)))).))))).....)))).))))(((.((((....................................)))).))).))))).)))))))))))))))))
)))))))))))...........


SIMILARITIES
miRBase osa-MIR812h: 0.00007

PMRD osa-miR812h: 0.00007

microPC no hits		UniProt no hits

RFAM MIR1122: 0.00002		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;