ABOUT THIS RECORDspecies: Vigna unguiculata
miRNA family: MIR2118
source: miRNEST
Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTCCTAATGCTTCCTATTCTC miRNA* GAATAGCAGCAATGGGTATT mismatches: 5 bulges: 1 |
pre-miRNA
ATTCCTCAAATCAGAATAGCAGCAATGGGTATTTGTACAGTTCAGCCTATCCCTCTCTCGAAACTTCCTAATGCTTCCTATTCTCTCCCTAAGCC
dot-bracket secondary structure
............(((((((.((((.((((.....((....(((................)))))..)))).))))..)))))))...........
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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ATTCCTCAAATCAGAATAGCAGCAATGGGTATTTGTACAGTTCAGCCTATCCCTCTCTCGAAACTTCCTAATGCTTCCTATTCTCTCCCTAAGCC
dot-bracket secondary structure
............(((((((.((((.((((.....((....(((................)))))..)))).))))..)))))))...........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
