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ABOUT THIS RECORD

ID: MNEST007549
species: Vigna unguiculata
miRNA family: MIR160
source: miRNEST

Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCCTGGCTCCCTGTATGCCA

miRNA*
 GCGTGCGAGGAGTCATGCATG

mismatches: 2
bulges: 0
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pre-miRNA
 CATGGCTAAGTTTGCATTTGGTTTTATATGTTACTGTTAACATGCTTGGCGTGCCTGGCTCCCTGTATGCCATTTGCAGAGCCCATCAGAACAGTGATGG
CTTTAACTAATGGCGTGCGAGGAGTCATGCATGTTGTTAGTTATTAGTTAAAACAAAAACTGATGTAGTTTGGTTTCATAC

dot-bracket secondary structure
...((((((..(((((((.((((((...((((((((.((((..((..(((((((.(((((((.(((((((((((...((((((.((((......))))))
))))....))))))))))).))))))).)))))))))..)))).))))...))))))))))))))))).))))))......


SIMILARITIES
miRBase mtr-MIR160: 2e-16

PMRD ptc-miR160c: 0.0000000000006

microPC miR160: 9e-40		UniProt no hits

RFAM mir-160: 0.00000000001		most similar mature miRNAs

Identical with: miR160 from microPC (MNEST046062)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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