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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST007549
species: Vigna unguiculata
miRNA family: MIR160
source: miRNEST

Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCCTGGCTCCCTGTATGCCA

miRNA*
 GCGTGCGAGGAGTCATGCATG

mismatches: 2
bulges: 0
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pre-miRNA
 CATGGCTAAGTTTGCATTTGGTTTTATATGTTACTGTTAACATGCTTGGCGTGCCTGGCTCCCTGTATGCCATTTGCAGAGCCCATCAGAACAGTGATGG
CTTTAACTAATGGCGTGCGAGGAGTCATGCATGTTGTTAGTTATTAGTTAAAACAAAAACTGATGTAGTTTGGTTTCATAC

dot-bracket secondary structure
...((((((..(((((((.((((((...((((((((.((((..((..(((((((.(((((((.(((((((((((...((((((.((((......))))))
))))....))))))))))).))))))).)))))))))..)))).))))...))))))))))))))))).))))))......


SIMILARITIES
miRBase mtr-MIR160: 2e-16

PMRD ptc-miR160c: 0.0000000000006

microPC miR160: 9e-40		UniProt no hits

RFAM mir-160: 0.00000000001		most similar mature miRNAs

Identical with: miR160 from microPC (MNEST046062)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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