ABOUT THIS RECORDspecies: Trichosurus vulpecula
miRNA family: mir-28
source: miRNEST
Taxonomy by NCBI:
Trichosurus vulpecula Trichosurus Phalangeridae Diprotodontia Metatheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGACTGTGAGCTCCTTGAGA miRNA* TACAAGAAGTCTACCTGTCTTTC mismatches: 4 bulges: 2 |
pre-miRNA
TTCCTTCAAGTTTTAGCTAAAATCNNACCTTCTACAAGAAGTCTACCTGTCTTTCTTAGCCATCCTGGGCACATCTTGTTTGTGCAGAATTGTTTGCATA
TTTTCTCCCCATTAGACTGTGAGCTCCTTGAGATCAGGATGATNNTTGGCCTTTTTTGTATT
dot-bracket secondary structure
......((((.....(((((.(((...((((((.((((.(((.(((..((((.............((((...........((((((((....))))))))
.......))))..)))).))).))).)))))))..)))..)))..)))))....))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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TTCCTTCAAGTTTTAGCTAAAATCNNACCTTCTACAAGAAGTCTACCTGTCTTTCTTAGCCATCCTGGGCACATCTTGTTTGTGCAGAATTGTTTGCATA
TTTTCTCCCCATTAGACTGTGAGCTCCTTGAGATCAGGATGATNNTTGGCCTTTTTTGTATT
dot-bracket secondary structure
......((((.....(((((.(((...((((((.((((.(((.(((..((((.............((((...........((((((((....))))))))
.......))))..)))).))).))).)))))))..)))..)))..)))))....))))....
SIMILARITIES| miRBase mdo-mir-151: 0.000008 PMRD no hits microPC no hits | UniProt no hits RFAM mir-708: 0.0000000006 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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