ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: miR-196b
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGACAGCACGACACTGCCTTC miRNA* AGGTAGTTTCCTGTTGTTGGG mismatches: 4 bulges: 0 |
pre-miRNA
TTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTC
dot-bracket secondary structure
...(((((((.((.(((((((((((..........))))))))))).)).)))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTC
dot-bracket secondary structure
...(((((((.((.(((((((((((..........))))))))))).)).)))))))..
SIMILARITIES| miRBase mml-mir-196b: 8e-28 PMRD no hits microPC no hits | UniProt no hits RFAM mir-196: 3e-21 | most similar mature miRNAs |
Identical with: ptr-mir-196b from miRBase (MNEST030273) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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