miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Macaca fascicularis, Papio anubis, Homo sapiens, Peromyscus maniculatus bairdii, Pongo abelii, Oryctolagus cuniculus, Macaca nemestrina, Cavia porcellus, Peromyscus polionotus subgriseus, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST007975
species: Homo sapiens
miRNA family: miR-196b
source: miRNEST

Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CGACAGCACGACACTGCCTTC

miRNA*
 AGGTAGTTTCCTGTTGTTGGG

mismatches: 4
bulges: 0
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pre-miRNA
 TTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTC

dot-bracket secondary structure
...(((((((.((.(((((((((((..........))))))))))).)).)))))))..


SIMILARITIES
miRBase mml-mir-196b: 8e-28

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-196: 3e-21		most similar mature miRNAs

Identical with: ptr-mir-196b from miRBase (MNEST030273)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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