miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST008299
species: Vitis vinifera
miRNA family: MIR827
source: miRNEST

Taxonomy by NCBI:
Vitis vinifera Vitis Vitaceae Vitales rosids incertae sedis rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTAGATGACCAGCAACAAAAC

miRNA*
 TTGTTGATGATCATCTAATC

mismatches: 3
bulges: 1
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pre-miRNA
 AGCCGTGATGTGATGCATTATCCTGAATGTGTTTGTTGATGATCATCTAATCATCCTGCCATGAGCGTTAAACATGACTAACAATGACTAGATGACCAGC
AACAAAACATATTCATAGCTGCAAAACACATACTAGA

dot-bracket secondary structure
.......(((((.(((((((...(((((((((((((((.((.(((((((.((((.....((((.........)))).......)))).))))))).)).)
))).)))))))))))))).))))...)))))......


SIMILARITIES
miRBase osa-MIR827b: 0.00003

PMRD osa-miR827b: 0.00003

microPC miR827: 0.0004		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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