ABOUT THIS RECORDspecies: Medicago truncatula
miRNA family: MIR2652
source: miRNEST
Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATGCAAGGTGCATAAGGATT miRNA* TCCTTATGCAGGGTGCTGGAAA mismatches: 5 bulges: 1 |
pre-miRNA
GCTTTTATGCAGGGTGCTGGAAATCCTTATGCAGGGTGCTGGAAATCATTACGTACATCGAATGGTTTTGGAGTACAACTCATAGAAACAATTTTTGGATT
TATGCAAGGTGCATAAGGATTTCATTATGCACCATAACTG
dot-bracket secondary structure
)...........(((((..((((((((((((((...(((...(((((............((((.(((((.((((...))))...))))).))))...))))
)..)))...)))))))))))))).....))))).......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GCTTTTATGCAGGGTGCTGGAAATCCTTATGCAGGGTGCTGGAAATCATTACGTACATCGAATGGTTTTGGAGTACAACTCATAGAAACAATTTTTGGATT
TATGCAAGGTGCATAAGGATTTCATTATGCACCATAACTG
dot-bracket secondary structure
)...........(((((..((((((((((((((...(((...(((((............((((.(((((.((((...))))...))))).))))...))))
)..)))...)))))))))))))).....))))).......
SIMILARITIES| miRBase mtr-MIR2652a: 3.0E-54 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
