miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST008351
species: Medicago truncatula
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTACTCCCTCCGTCCCAAATT

miRNA*
 TTTGGGNNGGAGGGAGTATAT

mismatches: 3
bulges: 0
View larger
pre-miRNA
 GTTCACCCCTCTTACTCCCTCCGTCCCAAATTGTATGACGTTTTGGGCATTTCACACATATTAAGAAATGCAATTAATATTGNGNGGAAAAGAGATATTA
TGAGTTGTTTTACAAAATTGTCCTTAATAAATAATATGGGAAAGATAAATGAAAGAATTGAAAGAAGAGAGAGTAATAAATAATTAAGGNTATAATAGGA
AAAGTAACATTAATGNTGCATTGGTATTTTAAAGCGACATATAATTTGGGACAATTTTTTTTTTTCCTAAAGCGACATACAATTTGGGNNGGAGGGAGTA
TATTATATTAT

dot-bracket secondary structure
............((((((((((..(((((((((((((.(((((((((((((((...........)))))))...(((((((............)))))))
..((((.(((((....(((.((((..((.....))..))))..)))...))))).))))((((((((((((.((..(((((.((..((..(((.......
...)))...)).(((.(((.((((....)))).))).))))).)))))..))..)))))))))))))))))))).)))))))))))))..))))))))))
...........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM MIR806: 0.0003		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record




Liczniki na strone;