miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST008352
species: Medicago truncatula
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AATGGGACGGAGGGAGTAATA

miRNA*
 ATATTCTCTCCGTCCCATAAT

mismatches: 2
bulges: 0
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pre-miRNA
 CTCATTANCGTAATATTCTCTCCGTCCCATAATANCTGAGTCATTTACAAAAAAATATTGTTCTAGAAAAATTGACTCATTTCATTTTTCAATACAATAT
TAATTACTTTTTTCCAATTATAACATTAATTAATACCACTTTCACCACTCCCAATTCAATATATTATACTTTGCAGTTATGATAAAGAAGAATACACCAA
CAATTTTTTGACAAAAGAATACACCAATAGTTGACAAGGGTACTCAAACCCATTTTTTTCTCTCTCTTTCACTTATACACTTTTTCTTAATAAGTATGAA
ATGAGTCAAAGGCCCCGTTAAAATGGGACGGAGGGAGTAATATATATCACT

dot-bracket secondary structure
.....((..(((.(((((((((((((((((..((..((.(((.((.((((.......))))...)).....((((((((((((((((.((((...(((..
........((((((..((((((((..(((.(((((..........................)))))....)))..))))))))...))))))........
..)))..)))).))).(((.........((..((.((((((......)))).)).))..))......)))((((((.............)))))).))))
))))))))).)))..)).))..))))))))))))))))).))).)).....


SIMILARITIES
miRBase osa-MIR812h: 0.00007

PMRD osa-miR812h: 0.00007

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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