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ABOUT THIS RECORD
ID:
MNEST008424
species:
Medicago truncatula
miRNA family:
MIR2119
source:
miRNEST
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCAAAGGGAGGTGTGGAGTAG
miRNA*
ACTCCCTACTTTCCTTTGATT
mismatches:
2
bulges:
0
View larger
pre-miRNA
AGCAATGATGTTACTCCTATACTTTATTTTTTTTACACTAAGAT
ACTCCCTACTTTCCTTTGATT
GGAAATAAAGAGAGACAAAAAGGTAAATTTAATTT
CTCTTCTTATGTCAA
TCAAAGGGAGGTGTGGAGTAG
AGGTGTAAAAAGTAAAGTATAAGAATAATGTCATTGTAAAG
dot-bracket secondary structure
.((((((((((((.((.((((((((((..((((((((((....(
(((((.(((((((((((((((
((..((((.((((((...................)
))))).)))).))))
))))))))))))).)))))).
.)))))))))))))))))))).)).))))))))))))....
SIMILARITIES
miRBase
mtr-MIR2119
:
1e-57
PMRD
mtr-miR2119
:
1e-57
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
degradome data
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