ABOUT THIS RECORDspecies: Chlamydomonas reinhardtii
miRNA family: MIRf368
source: miRNEST
Taxonomy by NCBI:
Chlamydomonas reinhardtii Chlamydomonas Chlamydomonadaceae Chlamydomonadales Chlorophyceae Chlorophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCGGCTGCGGCTGCAGCTGCG miRNA* CGACTGCGGCTGCGGCTGCGG mismatches: 1 bulges: 0 |
pre-miRNA
ATCACGGCCGCGACTGCGGCTGCGGCTGCGGCCGCTGGGAGAGGCCCGACGCACCGGGCGCGCGTCGTGGCCCCCCTTGCTGGTTGCGCCCAACTCCCGT
GCGCCGGGGCGGCTTTGACTGCGGTCACCATCACGGCCGCGGCTGCGGCTGCAGCTGCGGCCGCTG
dot-bracket secondary structure
....((((((((.(((((((((((((((((((((.(((..((.(((((......))))).(((((((.((((((((.(((.(((((....))))).....
)))..)))).)))).)))).))).)).)))...))))))))))))))))))))).))))))))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATCACGGCCGCGACTGCGGCTGCGGCTGCGGCCGCTGGGAGAGGCCCGACGCACCGGGCGCGCGTCGTGGCCCCCCTTGCTGGTTGCGCCCAACTCCCGT
GCGCCGGGGCGGCTTTGACTGCGGTCACCATCACGGCCGCGGCTGCGGCTGCAGCTGCGGCCGCTG
dot-bracket secondary structure
....((((((((.(((((((((((((((((((((.(((..((.(((((......))))).(((((((.((((((((.(((.(((((....))))).....
)))..)))).)))).)))).))).)).)))...))))))))))))))))))))).))))))))...
SIMILARITIES| miRBase no hits PMRD ath-miRf10746-akr: 0.0005 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
