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Species belonging to selected taxon:
Volvox carteri
,
Chlamydomonas reinhardtii
ABOUT THIS RECORD
ID:
MNEST008511
species:
Chlamydomonas reinhardtii
miRNA family:
MIRf368
source:
miRNEST
Taxonomy by NCBI:
Chlamydomonas reinhardtii
Chlamydomonas
Chlamydomonadaceae
Chlamydomonadales
Chlorophyceae
Chlorophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCGGCTGCGGCTGCAGCTGCG
miRNA*
CGACTGCGGCTGCGGCTGCGG
mismatches:
1
bulges:
0
View larger
pre-miRNA
ATCACGGCCG
CGACTGCGGCTGCGGCTGCGG
CCGCTGGGAGAGGCCCGACGCACCGGGCGCGCGTCGTGGCCCCCCTTGCTGGTTGCGCCCAACTCCCGT
GCGCCGGGGCGGCTTTGACTGCGGTCACCATCACGGCC
GCGGCTGCGGCTGCAGCTGCG
GCCGCTG
dot-bracket secondary structure
....((((((
((.((((((((((((((((((
(((.(((..((.(((((......))))).(((((((.((((((((.(((.(((((....))))).....
)))..)))).)))).)))).))).)).)))...)))))
)))))))))))))))).))))
))))...
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10746-akr
:
0.0005
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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