miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST008606
species: Strongylocentrotus purpuratus
miRNA family: miR-4039
source: miRNEST

Taxonomy by NCBI:
Strongylocentrotus purpuratus Strongylocentrotus Strongylocentrotidae Echinoida Echinacea Euechinoidea Echinoidea Echinozoa Eleutherozoa Echinodermata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACAATTTGTTTCTTTGTATTT

miRNA*
 GTAAAAGAAATTCATTGTTA

mismatches: 4
bulges: 1
View larger
pre-miRNA
 TCAAATCTGTTCCATCTTATATGTAAAAGAAATTCATTGTTAATTCTGGTTTTCGTGTGTGTACAACATTGTCCTCATTGGCGGTGTGTTTTATTTCATG
ATCACTACAGAAATCACAACAATTTGTTTCTTTGTATTTTGTTGATCCTGTCAGAGCC

dot-bracket secondary structure
.....((((....(((..(((.(((((((((((..((((((..(((((....(((((.(((.(((.(((((((......))))))))))..)))..))))
)......))))).....))))))..)))))))).)))..))).))).....))))...


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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