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ABOUT THIS RECORD
ID:
MNEST008652
species:
Brassica oleracea
miRNA family:
MIRf975
source:
miRNEST
Taxonomy by NCBI:
Brassica oleracea
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AATCCAGCTAGTGGTGGTGGT
miRNA*
CACTGAAACTCGTTGGAGGTTC
mismatches:
5
bulges:
1
View larger
pre-miRNA
GGTGTATCGGAACAGTCTCTTT
CACTGAAACTCGTTGGAGGTTC
GGCTTCAAGGCAATCTGCCTTTCATCCA
AATCCAGCTAGTGGTGGTGGT
TCGGACA
TGAACACCGTGA
dot-bracket secondary structure
(((((.(((.....((((...(
(((((..(((.((((((..((.
((....((((((...))))))....)))
).)))))).)))..)))))).
..)))).
))))))))....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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