miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Brassica napus, Brassica oleracea var. alboglabra, Brassica rapa, Brassica oleracea



ABOUT THIS RECORD

ID: MNEST008652
species: Brassica oleracea
miRNA family: MIRf975
source: miRNEST

Taxonomy by NCBI:
Brassica oleracea Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AATCCAGCTAGTGGTGGTGGT

miRNA*
 CACTGAAACTCGTTGGAGGTTC

mismatches: 5
bulges: 1
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pre-miRNA
 GGTGTATCGGAACAGTCTCTTTCACTGAAACTCGTTGGAGGTTCGGCTTCAAGGCAATCTGCCTTTCATCCAAATCCAGCTAGTGGTGGTGGTTCGGACA
TGAACACCGTGA

dot-bracket secondary structure
(((((.(((.....((((...((((((..(((.((((((..((.((....((((((...))))))....)))).)))))).)))..))))))...)))).
))))))))....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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