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ABOUT THIS RECORD
ID:
MNEST008656
species:
Brassica oleracea
miRNA family:
MIR909
source:
miRNEST
Taxonomy by NCBI:
Brassica oleracea
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTAGGGTCAAGTTTGCATAG
miRNA*
GTAAAGATCGACCCAAGGCT
mismatches:
4
bulges:
1
View larger
pre-miRNA
AACCTGAACTGGTCGGTGTAT
TTTAGGGTCAAGTTTGCATAG
TTACGAGGAATGTGATT
GTAAAGATCGACCCAAGGCT
GCTTGACCGGCTTCAATC
dot-bracket secondary structure
....(((((((((((..(((.
(((.(((((..((((..((((
(((((.....)))))))
))..)))).))))).))).)
)).))))))).))))...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q944G5|PTR44_ARATH: 0.0000000001
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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