miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST008656
species: Brassica oleracea
miRNA family: MIR909
source: miRNEST

Taxonomy by NCBI:
Brassica oleracea Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTAGGGTCAAGTTTGCATAG

miRNA*
GTAAAGATCGACCCAAGGCT

mismatches: 4
bulges: 1

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pre-miRNA
AACCTGAACTGGTCGGTGTATTTTAGGGTCAAGTTTGCATAGTTACGAGGAATGTGATTGTAAAGATCGACCCAAGGCTGCTTGACCGGCTTCAATC

dot-bracket secondary structure
....(((((((((((..(((.(((.(((((..((((..(((((((((.....)))))))))..)))).))))).))).))).))))))).))))...


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q944G5|PTR44_ARATH: 0.0000000001

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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