ABOUT THIS RECORDspecies: Petrolisthes cinctipes
miRNA family: miR-1603
source: miRNEST
Taxonomy by NCBI:
Petrolisthes cinctipes Petrolisthes Porcellanidae Galatheoidea Anomura Pleocyemata Decapoda Eucarida Eumalacostraca Malacostraca Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGTTTTGTTTTGTGTTTTCA miRNA* GTCACATGAAACTTGACACAT mismatches: 4 bulges: 0 |
pre-miRNA
GTAGATACAACCGTGGGTACAAATTCAGATTGGTCACATGAAACTTGACACATAAGTATAGAACAGTATATAATATAGGTATAGGATATGAGACGTTATT
TTGTTTTGTTTTATTGTGTTTTGTTTTGTGTTTTCAGTATTTATTTGGGAGATCACAAGCAATCG
dot-bracket secondary structure
............((((...(((((....(((((..(((((((((..((((((..((.(((((((((...(((((.....((((...))))....))))).
))))))))).))..))))))..)))))))))..)))))....))))).....)))).........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
GTAGATACAACCGTGGGTACAAATTCAGATTGGTCACATGAAACTTGACACATAAGTATAGAACAGTATATAATATAGGTATAGGATATGAGACGTTATT
TTGTTTTGTTTTATTGTGTTTTGTTTTGTGTTTTCAGTATTTATTTGGGAGATCACAAGCAATCG
dot-bracket secondary structure
............((((...(((((....(((((..(((((((((..((((((..((.(((((((((...(((((.....((((...))))....))))).
))))))))).))..))))))..)))))))))..)))))....))))).....)))).........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
