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ABOUT THIS RECORD
ID:
MNEST008886
species:
Aphis gossypii
miRNA family:
mir-1322
source:
miRNEST
Taxonomy by NCBI:
Aphis gossypii
Aphis
Aphis
Aphidini
Aphidinae
Aphididae
Aphidoidea
Aphidomorpha
Aphidiformes
Sternorrhyncha
Hemiptera
Paraneoptera
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTTGCTGCTGCTGCTGCTGCA
miRNA*
CTGGTTGTGGCCGCAACAACAG
mismatches:
4
bulges:
1
View larger
pre-miRNA
TCGAGGCCGCT
GTTGCTGCTGCTGCTGCTGCA
CCGCCTCATGTCGTAGTGATGGCCGTTGTCCTGTGTCGAGTGTCTGCNCATGGCCATGGGCTGTTGCT
GCTGCTGCGGCGGCGG
CTGGTTGTGGCCGCAACAACAG
CACATCCC
dot-bracket secondary structure
........(((
((((.(((.(((((.(((((.
(((((.((.((.((((((((((((..((.((((.((.((...)).)).)).)).))..))))))))))
)).)))).)))))..)
).))).))))).))).))))))
).......
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10746-akr
:
0.000007
microPC
no hits
UniProt
no hits
RFAM
mir-598: 0.0005
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record