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ABOUT THIS RECORD
ID:
MNEST009020
species:
Choristoneura fumiferana
miRNA family:
miR-10a
source:
miRNEST
Taxonomy by NCBI:
Choristoneura fumiferana
Choristoneura
Archipini
Tortricinae
Tortricidae
Tortricoidea
Apoditrysia
Ditrysia
Heteroneura
Neolepidoptera
Glossata
Lepidoptera
Amphiesmenoptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAAATTCGTGCCTTGGGGAAA
miRNA*
GTTCTAGGTCGAATATTGT
mismatches:
4
bulges:
2
View larger
pre-miRNA
ATGAACTTGCC
AAAATTCGTGCCTTGGGGAAA
TTTAATAATGATGGAATG
GTTCTAGGTCGAATATTGT
ACTTATTT
dot-bracket secondary structure
..........(
((.(((((...(((((((..(
(((.((....)).)))).
.))))))).))))).))).
........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record