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Species belonging to selected taxon:

Choristoneura fumiferana



ABOUT THIS RECORD

ID: MNEST009020
species: Choristoneura fumiferana
miRNA family: miR-10a
source: miRNEST

Taxonomy by NCBI:
Choristoneura fumiferana Choristoneura Archipini Tortricinae Tortricidae Tortricoidea Apoditrysia Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAAATTCGTGCCTTGGGGAAA

miRNA*
GTTCTAGGTCGAATATTGT

mismatches: 4
bulges: 2

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pre-miRNA
ATGAACTTGCCAAAATTCGTGCCTTGGGGAAATTTAATAATGATGGAATGGTTCTAGGTCGAATATTGTACTTATTT

dot-bracket secondary structure
..........(((.(((((...(((((((..((((.((....)).))))..))))))).))))).))).........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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