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ABOUT THIS RECORD
ID:
MNEST009243
species:
Pristionchus pacificus
miRNA family:
miR-3533
source:
miRNEST
Taxonomy by NCBI:
Pristionchus pacificus
Pristionchus
Neodiplogasteridae
Diplogasterida
Chromadorea
Nematoda
Pseudocoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATGAAGTGCGATGTCGATATC
miRNA*
CATCGACTGTAATTCACGA
mismatches:
4
bulges:
2
View larger
pre-miRNA
NCAGCCTGCATTCATTGGAATGG
CATCGACTGTAATTCACGA
GACGACCCTACACAGTATC
ATGAAGTGCGATGTCGATATC
AGAAAGGACCTGTATGCC
AC
dot-bracket secondary structure
...((.((((.((.((....(((
.((((((.(((.((((.((
.((...........)).))
.)))).)))...)))))).))
)..)).))..)))).)).
..
SIMILARITIES
miRBase
gga-mir-3533
:
0.00002
PMRD
no hits
microPC
no hits
UniProt
sp|P90689|ACT_BRUMA: 0.000000007
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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