ABOUT THIS RECORDspecies: Euprymna scolopes
miRNA family: mir-548
source: miRNEST
Taxonomy by NCBI:
Euprymna scolopes Euprymna Sepiolidae Sepiolida Decapodiformes Neocoleoidea Coleoidea Cephalopoda Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTTGGTGCAAAAATAATGGCA miRNA* AAATTTTTTTTGCGCCAACCT mismatches: 5 bulges: 0 |
pre-miRNA
TTTATATATTAGTTGGTGCAAAAATAATGGCATTTTTGACGTTCAATTTCATGTCAAAAAAATTTTTTTTGCGCCAACCTAACGTTAA
dot-bracket secondary structure
...........(((((((((((((.(((....((((((((((........)))))))))).))).)))))))))))))..........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTTATATATTAGTTGGTGCAAAAATAATGGCATTTTTGACGTTCAATTTCATGTCAAAAAAATTTTTTTTGCGCCAACCTAACGTTAA
dot-bracket secondary structure
...........(((((((((((((.(((....((((((((((........)))))))))).))).)))))))))))))..........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
