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ABOUT THIS RECORD

ID: MNEST009506
species: Trichinella spiralis
miRNA family: miR-87
source: miRNEST

Taxonomy by NCBI:
Trichinella spiralis Trichinella Trichinellidae Trichocephalida Enoplia Enoplea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CGCCTGGAACTTTCGTCTCAG

miRNA*
 GAGCAAAGTTTCAGGTGTG

mismatches: 1
bulges: 2
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pre-miRNA
 GGAAGAAGGCCTTTTGCCTGGCGCCTGGAACTTTCGTCTCAGCCTTAGATTTTGACAAGGTGAGCAAAGTTTCAGGTGTGTCGGCGAACAGGCAATAT

dot-bracket secondary structure
........((((((((((..((((((((((((((.(.((((.((((..........)))))))))))))))))))))))...)))))).)))).....


SIMILARITIES
miRBase aae-mir-87: 0.00000002

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-87: 9e-45		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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