miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST009558
species:
Drosophila grimshawi
miRNA family:
mir-138
source:
miRNEST
Taxonomy by NCBI:
Drosophila grimshawi
grimshawi subgroup
grimshawi group
grimshawi clade
picture wing clade
Hawaiian Drosophila
Drosophila
Drosophiliti
Drosophilina
Drosophilini
Drosophilinae
Drosophilidae
Ephydroidea
Acalyptratae
Schizophora
Cyclorrhapha
Eremoneura
Muscomorpha
Brachycera
Diptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGCTGGTGCTGTGGATCATGC
miRNA*
ATTATAGATGGCATCACCTGT
mismatches:
4
bulges:
0
View larger
pre-miRNA
CGCGTCTATTGTGTAACTGCTTTGCTTGAGTTTCTGGTCAGC
ATTATAGATGGCATCACCTGT
CGCATTAAATCGGAGGAGACGCTGCTGCCTGGTGCCA
TGGTGC
AGCTGGTGCTGTGGATCATGC
AGATCTTTGCCAGGACACTGCAGCAATACGAGATGCGTG
dot-bracket secondary structure
(((((((...((((..((((..((((((.((....((((.((
((.((..(((((((((.(((.
(((.....(((((.((........))..)))))....
..))))
)).)))))))))..)).))))
.))))...)))))).))..))))..)))).)))))))..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q9VSF2|MED24_DROME: 1e-17
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record