miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Drosophila melanogaster, Drosophila simulans, Drosophila sechellia, Drosophila auraria, Drosophila pseudoobscura, Drosophila willistoni, Drosophila ananassae, Drosophila virilis, Drosophila virilis, Drosophila erecta, Drosophila grimshawi, Drosophila mojavensis, Drosophila mojavensis, Drosophila yakuba



ABOUT THIS RECORD

ID: MNEST009558
species: Drosophila grimshawi
miRNA family: mir-138
source: miRNEST

Taxonomy by NCBI:
Drosophila grimshawi grimshawi subgroup grimshawi group grimshawi clade picture wing clade Hawaiian Drosophila Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGCTGGTGCTGTGGATCATGC

miRNA*
ATTATAGATGGCATCACCTGT

mismatches: 4
bulges: 0

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pre-miRNA
CGCGTCTATTGTGTAACTGCTTTGCTTGAGTTTCTGGTCAGCATTATAGATGGCATCACCTGTCGCATTAAATCGGAGGAGACGCTGCTGCCTGGTGCCA
TGGTGCAGCTGGTGCTGTGGATCATGCAGATCTTTGCCAGGACACTGCAGCAATACGAGATGCGTG


dot-bracket secondary structure
(((((((...((((..((((..((((((.((....((((.((((.((..(((((((((.(((.(((.....(((((.((........))..)))))....
..)))))).)))))))))..)).)))).))))...)))))).))..))))..)))).)))))))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q9VSF2|MED24_DROME: 1e-17

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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