ABOUT THIS RECORDspecies: Rhipicephalus appendiculatus
miRNA family: mir-1297
source: miRNEST
Taxonomy by NCBI:
Rhipicephalus appendiculatus Rhipicephalus Rhipicephalus Rhipicephalinae Ixodidae Ixodoidea Ixodida Parasitiformes Acari Arachnida Chelicerata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTCAAGTAATTCAGGTGGTAG miRNA* GCCACAGTGGAGACGTGACGA mismatches: 4 bulges: 2 |
pre-miRNA
GAAGCGCGGGTGGCCACAGTGGAGACGTGACGAGTACGTGGTCAAGTAATTCAGGTGGTAGCCTTGGAGG
dot-bracket secondary structure
.......((((.(((((..((((.((.((((.........)))).))..)))).))))).))))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
GAAGCGCGGGTGGCCACAGTGGAGACGTGACGAGTACGTGGTCAAGTAATTCAGGTGGTAGCCTTGGAGG
dot-bracket secondary structure
.......((((.(((((..((((.((.((((.........)))).))..)))).))))).))))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
