miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Ixodes scapularis, Rhipicephalus microplus, Rhipicephalus appendiculatus



ABOUT THIS RECORD

ID: MNEST009644
species: Rhipicephalus appendiculatus
miRNA family: mir-1297
source: miRNEST

Taxonomy by NCBI:
Rhipicephalus appendiculatus Rhipicephalus Rhipicephalus Rhipicephalinae Ixodidae Ixodoidea Ixodida Parasitiformes Acari Arachnida Chelicerata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTCAAGTAATTCAGGTGGTAG

miRNA*
GCCACAGTGGAGACGTGACGA

mismatches: 4
bulges: 2

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pre-miRNA
GAAGCGCGGGTGGCCACAGTGGAGACGTGACGAGTACGTGGTCAAGTAATTCAGGTGGTAGCCTTGGAGG

dot-bracket secondary structure
.......((((.(((((..((((.((.((((.........)))).))..)))).))))).))))......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





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