ABOUT THIS RECORDspecies: Meloidogyne chitwoodi
miRNA family: miR-1279
source: miRNEST
Taxonomy by NCBI:
Meloidogyne chitwoodi Meloidogyne Meloidogyninae Meloidogynidae Tylenchoidea Tylenchina Tylenchida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATATTCCTTCTTTTTCCCA miRNA* AAAGAAATAAGGAAAATGAAG mismatches: 5 bulges: 0 |
pre-miRNA
TTATAATAAATATTTTCCTTTTCATATTCCTTCTTTTTCCCAATCCAAAAGATTCAAAGAAATAAGGAAAATGAAGAGGGTAAAAAATACCGAA
dot-bracket secondary structure
............((.((((((((((.((((((.(((((...((((.....))))...))))).)))))).)))))))))).))...........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TTATAATAAATATTTTCCTTTTCATATTCCTTCTTTTTCCCAATCCAAAAGATTCAAAGAAATAAGGAAAATGAAGAGGGTAAAAAATACCGAA
dot-bracket secondary structure
............((.((((((((((.((((((.(((((...((((.....))))...))))).)))))).)))))))))).))...........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
