ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-448
source: miRBase, original name: hsa-mir-448 (MI0001637)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGCATATGTAGGATGTCCCAT miRNA* TGAACATCCTGCATAGTGCTGCC mismatches: 3 bulges: 1 |
pre-miRNA
GCCGGGAGGTTGAACATCCTGCATAGTGCTGCCAGGAAATCCCTATTTCATATAAGAGGGGGCTGGCTGGTTGCATATGTAGGATGTCCCATCTCCCAGC
CCACTTCGTCA
dot-bracket secondary structure
((.(((((((.(.((((((((((((.(((.(((((..(..((((...((......))))))..)..))))).))))))))))))))).).))))))).))
...........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M, Nature. 434:338-345(2005)., "Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals"
GCCGGGAGGTTGAACATCCTGCATAGTGCTGCCAGGAAATCCCTATTTCATATAAGAGGGGGCTGGCTGGTTGCATATGTAGGATGTCCCATCTCCCAGC
CCACTTCGTCA
dot-bracket secondary structure
((.(((((((.(.((((((((((((.(((.(((((..(..((((...((......))))))..)..))))).))))))))))))))).).))))))).))
...........
SIMILARITIES| miRBase ppy-mir-448: 2e-58 PMRD no hits microPC no hits | UniProt no hits RFAM mir-448: 4e-41 |
Identical with: ptr-mir-448 from miRBase (MNEST030376) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M, Nature. 434:338-345(2005)., "Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals"
