miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST033343
species:
Bos taurus
miRNA family:
mir-154
source:
miRBase, original name:
bta-mir-369
(
MI0005020
)
Taxonomy by NCBI:
Bos taurus
Bos
Bovinae
Bovidae
Pecora
Ruminantia
Cetartiodactyla
Laurasiatheria
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AATAATACATGGTTGATCTTT
miRNA*
AGATCGACCGTGTTATATTCG
mismatches:
2
bulges:
0
View larger
pre-miRNA
TGAAGGG
AGATCGACCGTGTTATATTCG
CTTTATTGACTTCG
AATAATACATGGTTGATCTTT
TCTCAG
dot-bracket secondary structure
(((..((
(((((((((((((..((((((
............))
))))..)))))))))))))))
..))).
SIMILARITIES
miRBase
mml-mir-369
:
1e-33
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-154: 3e-25
Identical with:
ppy-mir-369
from miRBase (
MNEST030972
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
cloned
references
[
1
] Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP,
Physiol Genomics. 29:35-43(2007).
,
"Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues"