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ABOUT THIS RECORD

ID: MNEST035039
species: Daphnia pulex
miRNA family: miR-iab
source: miRBase, original name: dpu-mir-iab-4 (MI0012258)

Taxonomy by NCBI:
Daphnia pulex Daphnia Daphniidae Anomopoda Cladocera Diplostraca Phyllopoda Branchiopoda Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CGGTATACCTTCAGTATACGTAAC

miRNA*
ACGTATACTGAATGTATCCTGA

mismatches: 4
bulges: 1

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pre-miRNA
TGGATGTTTAACCCCCTGGACGTATACTGAATGTATCCTGAGCTTCATTCATTCCGGTATACCTTCAGTATACGTAACAGGAGGCAACACTTTCAAC

dot-bracket secondary structure
((((.((....((.((((.((((((((((((.((((((.(((.........))).)).)))).))))))))))))..)))).))....)).))))..


SIMILARITIES
miRBase dpu-mir-iab-4: 3e-50

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-iab-4: 2e-17

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"




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