miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
ABOUT THIS RECORD
ID:
MNEST035538
species:
Bombyx mori
miRNA family:
mir-124
source:
miRBase, original name:
bmo-mir-124
(
MI0004976
)
Taxonomy by NCBI:
Bombyx mori
Bombyx
Bombycinae
Bombycidae
Bombyciformes
Bombycoidea
Obtectomera
Ditrysia
Heteroneura
Neolepidoptera
Glossata
Lepidoptera
Amphiesmenoptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAAGGCACGCGGTGAATGCCAAG
miRNA*
TCGCGTTCACTGCCGGAGCCGTTATG
mismatches:
4
bulges:
3
View larger
pre-miRNA
CAGTCCACCTCC
TCGCGTTCACTGCCGGAGCCGTTATG
TATATTTAAAATTCA
TAAGGCACGCGGTGAATGCCAAG
AGCGGACTC
dot-bracket secondary structure
.(((((..(((.
..(((((((((((.(..(((.(((((
.............))
)))))).))))))))))))...)
)).))))).
SIMILARITIES
miRBase
ame-mir-124
:
0.0000000000003
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-124: 1e-40
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Tong CZ, Jin YF, Zhang YZ,
J Zhejiang Univ Sci B. 7:806-816(2006).
,
"Computational prediction of microRNA genes in silkworm genome"