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ABOUT THIS RECORD
ID:
MNEST037584
species:
Nasonia giraulti
miRNA family:
mir-252
source:
miRBase, original name:
ngi-mir-252
(
MI0016651
)
Taxonomy by NCBI:
Nasonia giraulti
Nasonia
Pteromalinae
Pteromalidae
Chalcidoidea
Chaldicoidea group
Apocrita
Hymenoptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAGTACTAGTGCCGCAGGAG
miRNA*
CCTGCTGCTCAAGTGCTTAT
mismatches:
3
bulges:
0
View larger
pre-miRNA
AATCCCGTCCTGTTCCT
AAGTACTAGTGCCGCAGGAG
TGACTAGACTGGGCTAGAAATTACCGCGTCT
CCTGCTGCTCAAGTGCTTAT
CAATGG
dot-bracket secondary structure
.........(((((..(
(((((((.(.((.(((((((
((.((((......)))).........)).))
))))).)).).)))))))).
.)))))
SIMILARITIES
miRBase
nlo-mir-252
:
2e-48
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-252: 8e-45
Identical with:
nlo-mir-252
from miRBase (
MNEST037615
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Sathyamurthy G, Swamy NR,
Int J Insect Sci. 2:1-13(2010).
,
"Computational Identification and Characterization of Putative miRNAs in Nasonia Species"