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ABOUT THIS RECORD
ID:
MNEST040419
species:
Arachis hypogaea
source:
miRBase, original name:
ahy-MIR3517
(
MI0015350
)
Taxonomy by NCBI:
Arachis hypogaea
Arachis
Dalbergieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTGACCACTGTGATCCCGGAA
miRNA*
CCAGCGTCACCGGTGTCAGC
mismatches:
3
bulges:
2
View larger
pre-miRNA
GCGTATCTAACCCAAGGAAGT
CTGACCACTGTGATCCCGGAA
TAACCCAAGGGGTACCCCCCTT
CCAGCGTCACCGGTGTCAGC
dot-bracket secondary structure
.....................
(((((.((((((((.(.(((.
.......(((((....))))))
)).).)))).))))))))).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ,
BMC Plant Biol. 10:3(2010).
,
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)"