miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST042664
species: Triticum aestivum
miRNA family: MIR1131
source: miRBase, original name: tae-MIR1131 (MI0006193)

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAGTACCGGTTCGTGGCTAACC

miRNA*
TTCGTGCCAGGAACCGGTACTAAT

mismatches: 2
bulges: 2

View larger
pre-miRNA
CATTAGTACCGGTTCGTGGCTAACCTTTAGCACCGGTTCGTGCCAGGAACCGGTACTAATGAGGGTGGTGGCAGGATGTTGTCAGTCTGGGCCCCCTCCA


dot-bracket secondary structure
(((((((((((((((.((((.((((.........))))...)))).))))))))))))))).(((.((.(((.((((.......))))..))))).))).



SIMILARITIES
miRBase tae-MIR1117: 0.0000003

PMRD tae-miR1131: 5e-52

microPC miR1131: 4e-25
UniProt no hits

RFAM no hits

Identical with: tae-miR1131 from PMRD (MNEST054706)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned, Northern

references

[1] Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q, Genome Biol. 8:R96(2007)., "Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)"




Liczniki na strone;