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ABOUT THIS RECORD

ID: MNEST044017
species: Schistosoma japonicum
source: Huang et al., original name: sja-miR-3073

Taxonomy by NCBI:
Schistosoma japonicum Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TATCCGTGCTGAGATTTCGTT

miRNA*
TGAGACTCCCCAGATACA

mismatches: 2
bulges: 3

View larger
pre-miRNA
GAGCTTTCTGTATCCGTGCTGAGATTTCGTTAGTCACCAGGCCATCAGCACTGATGAGACTCCCCAGATACATGAAGCGG

dot-bracket secondary structure
..(((((.((((((..((..(((.((((((((((......((.....)))))))))))))))..)))))))).)))))..


SIMILARITIES
miRBase sja-mir-3492: 1e-24

PMRD no hits

microPC no hits
UniProt no hits

RFAM Hammerhead_1: 0.00000002

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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