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Species belonging to selected taxon:
Schistosoma mansoni
,
Schistosoma japonicum
ABOUT THIS RECORD
ID:
MNEST044017
species:
Schistosoma japonicum
source:
Huang et al., original name:
sja-miR-3073
Taxonomy by NCBI:
Schistosoma japonicum
Schistosoma
Schistosomatidae
Schistosomatoidea
Strigeidida
Digenea
Trematoda
Platyhelminthes
Acoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TATCCGTGCTGAGATTTCGTT
miRNA*
TGAGACTCCCCAGATACA
mismatches:
2
bulges:
3
View larger
pre-miRNA
GAGCTTTCTG
TATCCGTGCTGAGATTTCGTT
AGTCACCAGGCCATCAGCACTGA
TGAGACTCCCCAGATACA
TGAAGCGG
dot-bracket secondary structure
..(((((.((
((((..((..(((.(((((((
(((......((.....)))))))
))))))))..))))))))
.)))))..
SIMILARITIES
miRBase
sja-mir-3492
:
1e-24
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
Hammerhead_1: 0.00000002
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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