ABOUT THIS RECORDspecies: Schistosoma japonicum
source: Huang et al., original name: sja-miR-3022
Taxonomy by NCBI:
Schistosoma japonicum Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGCGGAATCCAGGACACGCGTTT miRNA* TTGAGTTTTGGATTTCACTTG mismatches: 4 bulges: 2 |
pre-miRNA
GTGACTGGTAAGCGGAATCCAGGACACGCGTTTCAACCTAGATTTGAGTTTTGGATTTCACTTGCTAGTTACA
dot-bracket secondary structure
((((((((((((.((((((((((((...((..((......))..)).)))))))))))).)))))))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GTGACTGGTAAGCGGAATCCAGGACACGCGTTTCAACCTAGATTTGAGTTTTGGATTTCACTTGCTAGTTACA
dot-bracket secondary structure
((((((((((((.((((((((((((...((..((......))..)).)))))))))))).)))))))))))).
SIMILARITIES| miRBase sja-mir-3503: 5e-36 PMRD no hits microPC no hits | UniProt no hits RFAM Hammerhead_1: 0.001 |
Identical with: sja-mir-3503 from miRBase (MNEST039026) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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