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Species belonging to selected taxon:
Schistosoma mansoni
,
Schistosoma japonicum
,
Taenia solium
,
Schmidtea mediterranea
ABOUT THIS RECORD
ID:
MNEST044025
species:
Schistosoma japonicum
source:
Huang et al., original name:
sja-miR-3022
Taxonomy by NCBI:
Schistosoma japonicum
Schistosoma
Schistosomatidae
Schistosomatoidea
Strigeidida
Digenea
Trematoda
Platyhelminthes
Acoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGCGGAATCCAGGACACGCGTTT
miRNA*
TTGAGTTTTGGATTTCACTTG
mismatches:
4
bulges:
2
View larger
pre-miRNA
GTGACTGGTA
AGCGGAATCCAGGACACGCGTTT
CAACCTAGAT
TTGAGTTTTGGATTTCACTTG
CTAGTTACA
dot-bracket secondary structure
((((((((((
((.((((((((((((...((..(
(......)).
.)).)))))))))))).))))
)))))))).
SIMILARITIES
miRBase
sja-mir-3503
:
5e-36
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
Hammerhead_1: 0.001
Identical with:
sja-mir-3503
from miRBase (
MNEST039026
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record