ABOUT THIS RECORDspecies: Fragaria vesca
miRNA family: MIR157
source: microPC, original name: miR157
Taxonomy by NCBI:
Fragaria vesca Fragaria Potentilleae Rosodae Rosoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAAGATAGAGAGCAC miRNA* GCTCTCTATGCTTCTGTCA mismatches: 1 bulges: 1 |
pre-miRNA
TGACAGAAGATAGAGAGCACAGATGGATGACTTGCAATGAATATGCATCTCACTCCTTTGTGCTCTCTATGCTTCTGTCA
dot-bracket secondary structure
.((((((((((((((((((((((.((((((..((((.......))))..))).))))))))))))))))).)))))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
TGACAGAAGATAGAGAGCACAGATGGATGACTTGCAATGAATATGCATCTCACTCCTTTGTGCTCTCTATGCTTCTGTCA
dot-bracket secondary structure
.((((((((((((((((((((((.((((((..((((.......))))..))).))))))))))))))))).)))))))).
SIMILARITIES| miRBase ptc-MIR156j: 3e-19 PMRD ptc-miRf10223-akr: 3e-19 microPC miR157: 4e-40 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
