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Species belonging to selected taxon:

Fragaria vesca, Fragaria x ananassa



ABOUT THIS RECORD

ID: MNEST044822
species: Fragaria vesca
miRNA family: MIR157
source: microPC, original name: miR157

Taxonomy by NCBI:
Fragaria vesca Fragaria Potentilleae Rosodae Rosoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGACAGAAGATAGAGAGCAC

miRNA*
GCTCTCTATGCTTCTGTCA

mismatches: 1
bulges: 1

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pre-miRNA
TGACAGAAGATAGAGAGCACAGATGGATGACTTGCAATGAATATGCATCTCACTCCTTTGTGCTCTCTATGCTTCTGTCA

dot-bracket secondary structure
.((((((((((((((((((((((.((((((..((((.......))))..))).))))))))))))))))).)))))))).


SIMILARITIES
miRBase ptc-MIR156j: 3e-19

PMRD ptc-miRf10223-akr: 3e-19

microPC miR157: 4e-40
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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