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ABOUT THIS RECORD
ID:
MNEST044826
species:
Avena sativa
source:
microPC, original name:
miR1439
Taxonomy by NCBI:
Avena sativa
Avena
Aveninae
Poeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTTGGAACGGAGGGAGTA
miRNA*
CTCCCCCCGTTTCAAAATA
mismatches:
1
bulges:
0
View larger
pre-miRNA
TA
CTCCCCCCGTTTCAAAATA
TAAGATATTTTAGCTTTGTGAAGCAAATGTATCTAGACTACTTTTAGTATATAGGTTCACTCATGTTTAGAATGAATCT
ACACACTAAAACAAGTTTAGATACATTTTCTTTACAATCCTAACTTTATATTT
TTTTGGAACGGAGGGAGTA
dot-bracket secondary structure
((
(((((.(((((((((((..
..((((((.((((..((((((((.(((((((((((((((..(((((((.(.((((((((.((.......)).)))))))
).).)))))))..))))))))))))))).))))))))..))))....))))))
))))))))))).)))))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
MIR806: 0.0006
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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