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ABOUT THIS RECORD

ID: MNEST044891
species: Nicotiana benthamiana
miRNA family: MIR398
source: microPC, original name: miR398

Taxonomy by NCBI:
Nicotiana benthamiana Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTGTTCTCAGGTCGCCCCTG

miRNA*
 GGGGCAACCTGAGATCACATA

mismatches: 2
bulges: 0
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pre-miRNA
 CAGGGGCAACCTGAGATCACATATTGTCATTTTTCTTTAGTTGTTGAGTCTGGTTCAATATCTCACTATGTGTTCTCAGGTCGCCCCTG

dot-bracket secondary structure
(((((((.((((((((.((((((.((............((.(((((((.....))))))).)))).)))))).)))))))).)))))))


SIMILARITIES
miRBase bdi-MIR398c: 0.00002

PMRD vvi-miR398c: 0.00002

microPC miR398: 3e-44		UniProt no hits

RFAM MIR398: 0.0003

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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