miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST044921
species: Mesembryanthemum crystallinum
source: microPC, original name: miR396

Taxonomy by NCBI:
Mesembryanthemum crystallinum Mesembryanthemum Aizoaceae Caryophyllales core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTCCACAGCTTTCTTGAAC

miRNA*
TCAATAAAGCTGTGGGA

mismatches: 1
bulges: 0

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pre-miRNA
ATTCCACAGCTTTCTTGAACTGCATCTTCCCTAATTTTTTTATCTTTTGTTTTTCCTCTCTCAGATCCAATTTTTTCTTTGGTAAATACTTATAATTTATC
AAAAAAAAAAAAAGATGGATTTTTGGGAATTGAAAGATGGAAAATTTTAATTTGTGGGTTGCGGTTCAATAAAGCTGTGGGA


dot-bracket secondary structure
)((((((((((((.((((((((((....(((.(((((((((((((((((...(((((.....(((((((.((((((.((((((((((.......)))))))
))).)))))).....)))))))..))))).))))))))))))).....))))...))).)))))))))).))))))))))))



SIMILARITIES
miRBase osa-MIR396b: 4.0E-8

PMRD osa-miR396b: 4.0E-8

microPC miR396: 3.0E-33
UniProt no hits

RFAM 6MIR396: 7.0E-7

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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