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ABOUT THIS RECORD

ID: MNEST045370
species: Brassica napus
miRNA family: MIR398
source: microPC, original name: miR398

Taxonomy by NCBI:
Brassica napus Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTGTTCTCAGGTCACCCCT

miRNA*
 GGGTCGATATGAGAACACATG

mismatches: 3
bulges: 1
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pre-miRNA
 AGGGTCGATATGAGAACACATGTGCAATCAACGGCTGTAATGACGCCACATCATTATAACACATCTGTCTTTTCATGTGTTCTCAGGTCACCCCT

dot-bracket secondary structure
.((((.(((.((((((((((((......((...(.((((((((.......)))))))).).....))......)))))))))))).)))))))..


SIMILARITIES
miRBase ath-MIR398b: 0.000000000000001

PMRD ath-miR398b: 0.000000000000001

microPC miR398: 5e-49		UniProt no hits

RFAM MIR398: 9e-48

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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