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ABOUT THIS RECORD

ID: MNEST045402
species: Citrus sinensis
source: microPC, original name: miR319

Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTC

miRNA*
GCTCCTTGAAGTCCAAAAG

mismatches: 2
bulges: 0

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pre-miRNA
GAGCTCCTTGAAGTCCAAAAGAGGTTCTAGCAAGGGTAAATTGAGCTGCTGAGCTATGGATCCCACAGTCCTATGTATCAGATTTTAGGGTTTGTTTCTG
ATGATGGTGATGATAGGCTTGTGGCTTGCATATTTCTGGAGCTTCATTACCCCTTAAGTTTTACCCTTTTTTGGATTGAAGGGAGCTC


dot-bracket secondary structure
(((((((((..(((((((((((((....((((((((..(((.(((((.(.(((.((((.(..((((((.(((((.(((((....((((((.....)))))
)...)))))...))))).))))))..).)))).))).).))))).)))..)))))..)))....)))))))))))))..)))))))))



SIMILARITIES
miRBase csi-MIR159: 3e-92

PMRD ptc-miRf10271-akr: 0.0000000000002

microPC miR159: 3e-104
UniProt no hits

RFAM MIR159: 8e-16

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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