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Species belonging to selected taxon:

Brassica napus, Brassica oleracea var. alboglabra, Brassica rapa, Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Eucalyptus globulus, Eucalyptus gunnii, Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii, Limnanthes alba, Paullinia cupana var. sorbilis, Raphanus raphanistrum, Raphanus raphanistrum subsp. landra, Raphanus raphanistrum subsp. maritimus, Raphanus sativus, Raphanus sativus var. oleiformis, Thellungiella halophila, Theobroma cacao, Tropaeolum majus, Carica papaya, Citrus clementina, Arabidopsis thaliana, Brassica oleracea



ABOUT THIS RECORD

ID: MNEST045402
species: Citrus sinensis
source: microPC, original name: miR319

Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTC

miRNA*
GCTCCTTGAAGTCCAAAAG

mismatches: 2
bulges: 0

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pre-miRNA
GAGCTCCTTGAAGTCCAAAAGAGGTTCTAGCAAGGGTAAATTGAGCTGCTGAGCTATGGATCCCACAGTCCTATGTATCAGATTTTAGGGTTTGTTTCTG
ATGATGGTGATGATAGGCTTGTGGCTTGCATATTTCTGGAGCTTCATTACCCCTTAAGTTTTACCCTTTTTTGGATTGAAGGGAGCTC


dot-bracket secondary structure
(((((((((..(((((((((((((....((((((((..(((.(((((.(.(((.((((.(..((((((.(((((.(((((....((((((.....)))))
)...)))))...))))).))))))..).)))).))).).))))).)))..)))))..)))....)))))))))))))..)))))))))



SIMILARITIES
miRBase csi-MIR159: 3e-92

PMRD ptc-miRf10271-akr: 0.0000000000002

microPC miR159: 3e-104
UniProt no hits

RFAM MIR159: 8e-16

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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